miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus annuus



ABOUT THIS RECORD

ID: MNEST003141
species: Helianthus annuus
miRNA family: MIRf1653
source: miRNEST

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAACGAGCCAGCTCGGCTCGG

miRNA*
CGAGGTTGGCTTGGCTCG

mismatches: 4
bulges: 2

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pre-miRNA
GGCTTGGTTGTAAACGAGCCAGCTCGGCTCGGCTCGGCTTATAAACCAGCCGAGCTCGAGGTTGGCTTGGCTCG

dot-bracket secondary structure
..............((((((((.((((((((((((((((........)))))))).))).))))).))))))))


SIMILARITIES
miRBase no hits

PMRD osa-miRf10502-akr: 0.000003

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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